miRBase entry: chi-mir-758

Stem-loop chi-mir-758

Accession

MI0030833

Description

Capra hircus chi-mir-758 precursor miRNA

Sequence

ccacgugccuggguacaugaggugguugaccagagagcacacgcuucauuugugccgUUUGUGACCUGGUCCACUAACCcucaguaucuaauccccucuug
.........(((((((.(((((((((.((((((.(.(((.((((.........).))).)))..))))))).))))..))))))))))))...........

Structure

--ccacgugcc       a     --    u      a -a   c   - uuc 
           uggguac ugagg  uggu gaccag g  gca acg c   a
           ||||||| |||||  |||| |||||| |  ||| ||| |   u
           aucuaug acucC  AUCA CUGGUC C  UGU Ugc g   u
guucuccccua       -     CA    C      - AG   U   c ugu

Annotation confidence Not enough data

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Genome context

chr21: 67104376-67104476 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from chi-mir-758

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature chi-miR-758

Accession	MIMAT0036292
Description	Capra hircus chi-miR-758 mature miRNA
Sequence	58 - UUUGUGACCUGGUCCACUAACC - 79
Evidence	experimental Illumina [1]

References

PubMed ID: 23981187
Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
"Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
"Reprod Domest Anim (2014) 49:32-40