Stem-loop chi-mir-874

Accession

MI0030836

Description

Capra hircus chi-mir-874 precursor miRNA

Literature search

1 open access papers mention chi-mir-874
(3 sentences)

Sequence

gcuccuucggaugaauuuuugguguuagcccugCGGCCCCACGCACCAGGGUAAGAgagacucgcuucCUGCCCUGGCCCGAGGGACCGACuggcugggccugccuucug
..(((...))).(((.....(((..(((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))).)))....)))..

Structure

gcuccuucggau   uuuuu   gu     cug   C   A  CA        A   aga 
            gaa     ggu  uagcc   CGG CCC CG  CCAGGGUA GAg   c
            |||     |||  |||||   ||| ||| ||  |||||||| |||    
            cuu     ccg  gucgg   GCC GGG GC  GGUCCCGU cuu   u
----------gu   -ccgu   -g     uCA   A   A  CC        C   cgc 

Annotation confidence Low

Genome context

chr7: 48306811-48306920 [-]

Mature chi-miR-874-5p

• Accession: MIMAT0036296
• Description: Capra hircus chi-miR-874-5p mature miRNA
• Sequence: 34 - CGGCCCCACGCACCAGGGUAAGA - 56
• Evidence: experimental ; Illumina [1]

Mature chi-miR-874-3p

• Accession: MIMAT0036297
• Description: Capra hircus chi-miR-874-3p mature miRNA
• Sequence: 69 - CUGCCCUGGCCCGAGGGACCGAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40