Stem-loop chi-mir-877

Accession

MI0030838

Description

Capra hircus chi-mir-877 precursor miRNA

Sequence

cugccgagaggcucgagaagGUAGAGGAGAUGGCGCAGGGGacacgagcuaaaauggggggcuccugggaccccccaacaugugUCCUCUUCUCCCUCCUCCCAGGuguacg
..(((....))).......((..((((((..((.(.((((((((((.(......(((((((((....)).))))))).).)))))))))).).)))))))))).........

Structure

cugccgagaggcucgagaa  UA      AU  C C          a cuaaaa       -  c 
                   gG  GAGGAG  GG G AGGGGacacg g      ugggggg cu c
                   ||  ||||||  || | |||||||||| |      ||||||| ||  
                   CC  CUCCUC  CC C UCUCCUgugu c      acccccc gg u
----------gcauguGGA  --      --  U U          a -----a       a  g 

Annotation confidence Low

Genome context

chr23: 28494370-28494481 [-]

Mature chi-miR-877-5p

• Accession: MIMAT0036300
• Description: Capra hircus chi-miR-877-5p mature miRNA
• Sequence: 21 - GUAGAGGAGAUGGCGCAGGGG - 41
• Evidence: experimental ; Illumina [1]

Mature chi-miR-877-3p

• Accession: MIMAT0036301
• Description: Capra hircus chi-miR-877-3p mature miRNA
• Sequence: 85 - UCCUCUUCUCCCUCCUCCCAGG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40