Stem-loop chi-mir-96

Accession

MI0030843

Description

Capra hircus chi-mir-96 precursor miRNA

Literature search

1 open access papers mention chi-mir-96
(1 sentences)

Sequence

ccacuaccaucugcuuggccgacUUUGGCACUAGCACAUUUUUGcuugugucucuccgcucugagcaaucaugugcagugccaauaugggaaaagcaggaugc
.......(((((((((..((.(..((((((((.((((((..(((((((((......)))...))))))..))))))))))))))..).))..))))).)))).

Structure

ccacuac    -     gg  g cU        A      UU      ---   uc 
       cauc ugcuu  cc a  UUGGCACU GCACAU  UUGcuu   gug  u
       |||| |||||  || |  |||||||| ||||||  ||||||   |||   
       guag acgaa  gg u  aaccguga cgugua  aacgag   cgc  c
------c    g     aa  g au        -      cu      ucu   cu 

Annotation confidence Low

Genome context

chr4: 96232297-96232399 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from chi-mir-96

Mature chi-miR-96

• Accession: MIMAT0036309
• Description: Capra hircus chi-miR-96 mature miRNA
• Sequence: 24 - UUUGGCACUAGCACAUUUUUG - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40