Stem-loop chi-mir-98

Accession

MI0030844

Description

Capra hircus chi-mir-98 precursor miRNA

Literature search

1 open access papers mention chi-mir-98
(1 sentences)

Sequence

aggacucugcucaugcuggggUGAGGUAGUAAGUUGUAUUGUUgugggguagggauuuuaggccccaauuagaagauaaCUAUACAACUUACUACUUUCCCugguguguagcacauuca
..((...((((((((((((((.(((((((((((((((((.((((((((((...........)))))).........)))).))))))))))))))))))))))))))).))))...)).

Structure

ag  cuc    -          U                 U    ---------      aggg 
  ga   ugcu caugcugggg GAGGUAGUAAGUUGUAU GUUg         uggggu    a
  ||   |||| |||||||||| ||||||||||||||||| ||||         ||||||    u
  cu   acga gugugguCCC UUUCAUCAUUCAACAUA Caau         accccg    u
-a  uac    u          -                 U    agaagauua      gauu 

Annotation confidence Low

Genome context

chrX: 90705668-90705786 [-]

Mature chi-miR-98-5p

• Accession: MIMAT0036310
• Description: Capra hircus chi-miR-98-5p mature miRNA
• Sequence: 22 - UGAGGUAGUAAGUUGUAUUGUU - 43
• Evidence: experimental ; Illumina [1]

Mature chi-miR-98-3p

• Accession: MIMAT0036311
• Description: Capra hircus chi-miR-98-3p mature miRNA
• Sequence: 80 - CUAUACAACUUACUACUUUCCC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40