miRBase entry: dya-mir-9682

Stem-loop dya-mir-9682

Accession

MI0030900

Description

Drosophila yakuba dya-mir-9682 precursor miRNA

Sequence

CGGGGAAGUUACCUGGUGUAUUGuuuuuaaucaaccaAUCACUGGAUAGCUUUCCUAGAa
.((((((((((.((((((.((((.((......)).)))))))))).))))))))))....

Structure

---C          C      U    u  uu 
    GGGGAAGUUA CUGGUG AUUG uu  a
    |||||||||| |||||| |||| ||   
    UCCUUUCGAU GGUCAC UAac aa  a
aAGA          A      -    c  cu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 4178218-4178277 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dya-mir-9682

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-9682-5p

Accession	MIMAT0039172
Description	Drosophila yakuba dya-miR-9682-5p mature miRNA
Sequence	1 - CGGGGAAGUUACCUGGUGUAUUG - 23
Evidence	experimental Illumina [1]

Mature dya-miR-9682-3p

Accession	MIMAT0039173
Description	Drosophila yakuba dya-miR-9682-3p mature miRNA
Sequence	38 - AUCACUGGAUAGCUUUCCUAGA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250