Stem-loop dvi-mir-9721

Accession

MI0030986

Description

Drosophila virilis dvi-mir-9721 precursor miRNA

Sequence

49836 reads, 147.0 reads per million, 37 experiments

uaugcaagaaagggcguuuguUUCUGCGGUUCGAAAUAGCGUCaaaaguuaucuuccagccgACACUAUUUCUUACCUCAUUGAcgaaacacuuuuauucucaccg
........(((((...((((((..((.(((..(((((((.(((..................))).)))))))..))).))..))))))...)))))..........

Structure

--uaugcaag     gcg      UC  C   UC       C   aaaaguua 
          aaagg   uuuguU  UG GGU  GAAAUAG GUC        u
          |||||   ||||||  || |||  ||||||| |||         
          uuuuc   aagcAG  AC CCA  CUUUAUC CAg        c
gccacucuua     aca      UU  U   UU       A   ccgaccuu 

Annotation confidence High

Genome context

scaffold_12970: 9419681-9419786 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9721

Mature dvi-miR-9721-5p

• Accession: MIMAT0039315
• Description: Drosophila virilis dvi-miR-9721-5p mature miRNA
• Sequence: 22 - UUCUGCGGUUCGAAAUAGCGUC - 43
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9721-3p

• Accession: MIMAT0039316
• Description: Drosophila virilis dvi-miR-9721-3p mature miRNA
• Sequence: 63 - ACACUAUUUCUUACCUCAUUGA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250