miRBase entry: dvi-mir-9721

Stem-loop dvi-mir-9721

Accession

MI0030986

Description

Drosophila virilis dvi-mir-9721 precursor miRNA

Sequence

uaugcaagaaagggcguuuguUUCUGCGGUUCGAAAUAGCGucAAAAGUUAUCUUCCAGCCGAcacuauuucuuaccucauugacgaaacacuuuuauucucaccg
........(((((...((((((..((.(((..(((((((.(((..................))).)))))))..))).))..))))))...)))))..........

Structure

--uaugcaag     gcg      UC  C   UC       C   AAAAGUUA 
          aaagg   uuuguU  UG GGU  GAAAUAG Guc        U
          |||||   ||||||  || |||  ||||||| |||         
          uuuuc   aagcag  ac cca  cuuuauc cAG        C
gccacucuua     aca      uu  u   uu       a   CCGACCUU

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12970: 9419681-9419786 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9721

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9721-5p

Accession	MIMAT0039315
Description	Drosophila virilis dvi-miR-9721-5p mature miRNA
Sequence	22 - UUCUGCGGUUCGAAAUAGCG - 41
Evidence	experimental Illumina [1]

Mature dvi-miR-9721-3p

Accession	MIMAT0039316
Description	Drosophila virilis dvi-miR-9721-3p mature miRNA
Sequence	44 - AAAAGUUAUCUUCCAGCCGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250