Stem-loop gma-MIR9727

Accession

MI0031007

Description

Glycine max gma-MIR9727 precursor miRNA

Literature search

1 open access papers mention gma-MIR9727
(1 sentences)

Sequence

11520 reads, 53.0 reads per million, 176 experiments

ugcacauauaaaaaauauaaaaggaauaaaagauguagaUGAAGUUACUCUGAGCACUGAGagucauauguauagaaaucauuuccuugucaucucuauuuauagaguugaguuggagauuuucauACAUGUGCCUCUUCGUCGCUCagauuaacuucaucuuggucucuucacuccuuaccauuuuuugugugucugca
((((((((((((((((....(((((.....((((..(((((((((((.(((((((((.(((((.(((((((((.((((..((((((...(((.(((((....))))).)))...))))))))))))))))))).))))).)).))))))).)))))))))))..))))......)))))...)))))))))))))..)))

Structure

   --             auaa     -auaaa    gu           C       -  U     u         a    uc      uug   u     u 
ugc  acauauaaaaaau    aagga      agau  agaUGAAGUUA UCUGAGC AC GAGag cauauguau gaaa  auuucc   uca cucua u
|||  |||||||||||||    |||||      ||||  ||||||||||| ||||||| || ||||| ||||||||| ||||  ||||||   ||| |||||  
acg  uguguguuuuuua    uuccu      ucug  ucuacuucaau agaCUCG UG UUCUC GUGUACAua cuuu  uagagg   agu gagau u
   uc             -cca     cacuuc    gu           u       C  C     C         -    --      uug   u     a 

Annotation confidence Medium

Genome context

chr14: 6410597-6410796 [-]

Mature gma-miR9727-5p

• Accession: MIMAT0036345
• Description: Glycine max gma-miR9727-5p mature miRNA
• Sequence: 40 - UGAAGUUACUCUGAGCACUGAG - 61
• Evidence: experimental ; Illumina [1]

Mature gma-miR9727-3p

• Accession: MIMAT0054416
• Description: Glycine max gma-miR9727-3p mature miRNA
• Sequence: 127 - ACAUGUGCCUCUUCGUCGCUC - 147
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153