Stem-loop gma-MIR9730

Accession

MI0031011

Description

Glycine max gma-MIR9730 precursor miRNA

Sequence

10786 reads, 53.0 reads per million, 178 experiments

aggcuugcagcaguuaugacaacaauugUGGGGUUUUGUGUUGCAAUCAUgacuauuuaagcuuuuggcuuagguuccauuuuugcucuugguucaaagguggaaaaauugguuuugcccauaaaaauguuuauuuacaccuuggaaccaggggugaaauugacacaucggcaaaaaaauuaaauuugcaugauugcaaugugaaaucccaCGAUUGCUGUCAUAACUGCUGCaaggc
.(.((((((((((((((((((.(((((((((((((((((((((((((((((...((((((..((((.(((...((..((.(((((((((((((((.((((((..((.....(((((.......))))).....))..)))))).))))))))))))))).))..))...))).))))..))))))...))))))))))))))))))))))))))))).)))))))))))))))))).)

Structure

a g                  a                             acu      gc    g   uag  uc  u               a      ga  aauug     gc 
 g cuugcagcaguuaugaca caauugUGGGGUUUUGUGUUGCAAUCAUg   auuuaa  uuuu gcu   gu  ca uuuugcucuugguuc aaggug  aa     guuuu  c
 | |||||||||||||||||| |||||||||||||||||||||||||||||   ||||||  |||| |||   ||  || ||||||||||||||| ||||||  ||     |||||  c
 c gaaCGUCGUCAAUACUGU GUUAGCacccuaaaguguaacguuaguac   uaaauu  aaaa cgg   ca  gu aaaguggggaccaag uuccac  uu     uaaaa  a
- g                  C                             guu      aa    a   cua  ca  u               g      au  auuug     au 

Annotation confidence Low

Genome context

chr20: 37550244-37550481 [-]

Mature gma-miR9730-5p

• Accession: MIMAT0054420
• Description: Glycine max gma-miR9730-5p mature miRNA
• Sequence: 29 - UGGGGUUUUGUGUUGCAAUCAU - 50
• Evidence: experimental ; unknown

Mature gma-miR9730-3p

• Accession: MIMAT0036349
• Description: Glycine max gma-miR9730-3p mature miRNA
• Sequence: 212 - CGAUUGCUGUCAUAACUGCUGC - 233
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153