Stem-loop gma-MIR9734

Accession

MI0031016

Description

Glycine max gma-MIR9734 precursor miRNA

Sequence

2307 reads, 19.0 reads per million, 174 experiments

aagggugugUAGUAGAGAAAUAUCAUAGAAAGucaacuaucucuauaaauuaagcaacacaaauuucauucacaauggguauauuuuuguuauuaggugacuuaaguaacaugcucaUCGUGAAUGAGAUUUGUGUUGCUUaauuuauaagaauaguuaauuuucuaugaaauucuuccacuacaccccccu
..(((.(((((((.(((.(((.(((((((((((.((((((((.((((((((((((((((((((((((((((((.((((((((((((..(((((...)))))..)))))...))))))).)))))))))))))))))))))))))))))))).)))))).))))))))))).))).))).))))))))))...

Structure

-aa   u       A   A   A           c      -  c                              a       ---     uu     u 
   ggg gugUAGU GAG AAU UCAUAGAAAGu aacuau cu uauaaauuaagcaacacaaauuucauucac augggua   uauuu  guuau  
   ||| ||||||| ||| ||| ||||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||   |||||  ||||| a
   ccc cacauca cuu uua aguaucuuuua uugaua ga auauuuaaUUCGUUGUGUUUAGAGUAAGUG Uacucgu   augaa  cagug  
ucc   -       c   c   a           a      a  -                              C       aca     uu     g 

Annotation confidence Low

Genome context

chr14: 48700793-48700984 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR9734

Mature gma-miR9734-5p

• Accession: MIMAT0054425
• Description: Glycine max gma-miR9734-5p mature miRNA
• Sequence: 10 - UAGUAGAGAAAUAUCAUAGAAAG - 32
• Evidence: experimental ; unknown

Mature gma-miR9734-3p

• Accession: MIMAT0036354
• Description: Glycine max gma-miR9734-3p mature miRNA
• Sequence: 118 - UCGUGAAUGAGAUUUGUGUUGCUU - 141
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153