miRBase entry: gma-MIR9740

Stem-loop gma-MIR9740


Accession
MI0031022
Description
Glycine max gma-MIR9740 precursor miRNA


Sequence

643 reads, 12.0 reads per million, 98 experiments
aucuaUGUAGGUUCCAGUGAGGGAAAucaaagugaaggguccauaaacaaugaaagaagcuugguaugagagagugggcaagagugguguuaguacgaaucauuucuacccUUCACUUUCAUUUCCUUCAcuggcacccacauaaaua
...(((((.(((.((((((((((((((.((((((((((((.(((.....)))......(((((.(.......).)))))..(((((((..........)))))))..)))))))))))).)))))))))))))).))).)))))....

Structure
-auc     A   U              c            ccauaaacaaugaaagaagcuugguaugagagagugggcaa       guua 
    uaUGU GGU CCAGUGAGGGAAAu aaagugaagggu                                         gaguggu    g
    ||||| ||| |||||||||||||| ||||||||||||                                         |||||||     
    auaca cca ggucACUUCCUUUA UUUCACUUccca                                         uuuacua    u
auaa     c   c              C            ---------------------------------------uc       agca 


Annotation confidence Medium
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Genome context
chr16: 4672076-4672223 [+]

Database links

Mature gma-miR9740-5p

Accession MIMAT0036360
Description Glycine max gma-miR9740-5p mature miRNA
Sequence 6 - UGUAGGUUCCAGUGAGGGAAA - 26
Evidence experimental
Illumina [1]

Mature gma-miR9740-3p

Accession MIMAT0054430
Description Glycine max gma-miR9740-3p mature miRNA
Sequence 112 - UUCACUUUCAUUUCCUUCA - 130
Evidence experimental
unknown

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153