Stem-loop gma-MIR9744

Accession

MI0031026

Description

Glycine max gma-MIR9744 precursor miRNA

Sequence

6646 reads, 21.0 reads per million, 151 experiments

gaacuAAUGGAUAUGAGCUGCAUACAggacagaauggcugugaggggugcuggauuuguuuucugcuaugaagccuccauuggcuaagaucauuccccauguauacacuuucagacuuucucugagagcuucucucccauucuaacuuagccauggaaggcuccacacuguuuaaccuaucuggcacccaucagaguuauuCACUGAUGUCUGCAGCUCAUAUccaauaguucu
((((((.(((((((((((((((.(((.....((((((((.(((.(((((((((((..(((....((..((.(((((((((.(((((((............(......((((((((.....)))))))).....)...........))))))))))).)))))...))..))..)))..))))))))))).))).)))))))).....))).))))))))))))))).)))))).

Structure

-      A               U   ggaca        g   g           uu   uucu  ua  --a     -    u       aucauuccccau uauaca        c 
 gaacuA UGGAUAUGAGCUGCA ACA     gaauggcu uga gggugcuggau  guu    gc  ug   agccu ccau ggcuaag            g      cuuucaga u
 |||||| ||||||||||||||| |||     |||||||| ||| |||||||||||  |||    ||  ||   ||||| |||| |||||||            |      |||||||| u
 cuugau accUAUACUCGACGU UGU     Cuuauuga acu cccacggucua  caa    ug  ac   ucgga ggua ccgauuc            c      gagagucu u
u      a               C   AGUCA        g   a           uc   --uu  uc  acc     a    -       -aaucuuacccu -ucuuc        c 

Annotation confidence Low

Genome context

chr18: 53225973-53226206 [+]

Mature gma-miR9744-5p

• Accession: MIMAT0036364
• Description: Glycine max gma-miR9744-5p mature miRNA
• Sequence: 6 - AAUGGAUAUGAGCUGCAUACA - 26
• Evidence: experimental ; Illumina [1]

Mature gma-miR9744-3p

• Accession: MIMAT0054433
• Description: Glycine max gma-miR9744-3p mature miRNA
• Sequence: 202 - CACUGAUGUCUGCAGCUCAUAU - 223
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153