Stem-loop gma-MIR9746b

Accession

MI0031029

Description

Glycine max gma-MIR9746b precursor miRNA

Sequence

3894 reads, 39.0 reads per million, 166 experiments

acgguuauCCAAUUGAGAUUCAAGCACUUUUCuauguggcuuuaagguguguuugaauggaacaccuuaaauccaugaagaAAAGUGUUUGAAUCUCAAUUAGAUaacca
..(((((((.(((((((((((((((((((((((.(((((.((((((((((...........)))))))))).))))).))))))))))))))))))))))).))))))).

Structure

ac       C                       a     c          guuu 
  gguuauC AAUUGAGAUUCAAGCACUUUUCu ugugg uuuaaggugu    g
  ||||||| ||||||||||||||||||||||| ||||| ||||||||||    a
  ccaaUAG UUAACUCUAAGUUUGUGAAAaga guacc aaauuccaca    a
-a       A                       a     u          aggu 

Annotation confidence High

Genome context

chr3: 2840637-2840746 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gma-MIR9746b

Mature gma-miR9746b-5p

• Accession: MIMAT0054436
• Description: Glycine max gma-miR9746b-5p mature miRNA
• Sequence: 9 - CCAAUUGAGAUUCAAGCACUUUUC - 32
• Evidence: experimental ; unknown

Mature gma-miR9746b-3p

• Accession: MIMAT0036367
• Description: Glycine max gma-miR9746b-3p mature miRNA
• Sequence: 82 - AAAGUGUUUGAAUCUCAAUUAGAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153