Stem-loop gma-MIR9746d

Accession

MI0031031

Description

Glycine max gma-MIR9746d precursor miRNA

Sequence

2532 reads, 60.0 reads per million, 154 experiments

acgguuauccaagugAGAUUCAAGCACUUUUCUauguggcuuuaagguguguuugaauggaacaccuuaaauccaagaagaAAAGUGUUUGAAUCUCAAUUAGAUaacca
..(((((((.((.((((((((((((((((((((...(((.((((((((((...........)))))))))).)))...)))))))))))))))))))).)).))))))).

Structure

ac       c  g                    aug   c          guuu 
  gguuauc aa ugAGAUUCAAGCACUUUUCU   ugg uuuaaggugu    g
  ||||||| || ||||||||||||||||||||   ||| ||||||||||    a
  ccaaUAG UU ACUCUAAGUUUGUGAAAaga   acc aaauuccaca    a
-a       A  A                    aga   u          aggu 

Annotation confidence Low

Genome context

chr3: 2853469-2853578 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR9746d

Mature gma-miR9746d-5p

• Accession: MIMAT0054438
• Description: Glycine max gma-miR9746d-5p mature miRNA
• Sequence: 16 - AGAUUCAAGCACUUUUCU - 33
• Evidence: experimental ; unknown

Mature gma-miR9746d-3p

• Accession: MIMAT0036369
• Description: Glycine max gma-miR9746d-3p mature miRNA
• Sequence: 82 - AAAGUGUUUGAAUCUCAAUUAGAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153