Stem-loop gma-MIR9746h

Accession

MI0031035

Description

Glycine max gma-MIR9746h precursor miRNA

Sequence

acaguucuccaauugagauucaagcacuuuucuauguggcuuuaagguguguuuuauugcaugagcaagauguugaaugcagggauucauaaaacaaauugucauacuuuugcaugccuuaaguucucagcugagaaguuauuuuuggucagauuuaaagcaacuuaacuacauaugucaccuuaaaacagaacaguacucaucuauugcuauuacuauugcggugcaacaaauuuaauguuagaagaaugacauuaaacuuguuguguauaguauuugaguacucuucuauuuugaagcaauauaagugguuaaguuguuucgaauccaaccaaaaauaguuuagcuuaaggcaugcaauuguuugacaauuuguucuauuaauucauugcauucaacauuuugccuaagcaauugcauggaacaccuuaaauccaugaagaAAAGUGUUUGAAUCUCAAUUAGAUaacca
...(((.((.(((((((((((((((((((((((.(((((.((((((((((.....(((((.((.(((((((((((((((((((((((.(((.((((((((((((.((..(((((((((((((((((((....))))..(((((((((((..(((((.(((((((((((((((.(((((..(.((((((.((((.((((((((.....((((((.((.........(((((((.((((((((((......)))))))))).)))))))))))))))..)))))))).)))).)))))).)..))))).))))))))))))))).)))))..)))))))))))....)))))))))))))))..)).)))))))))))).))).))))).)))))))))))))))))).)).)))))........)))))))))).))))).))))))))))))))))))))))).)).)))..

Structure

aca   c  c                       a     c          ---guuuu     a  a                  -     c   a            u  uu               ucucagcugagaag           ca     a               a     ca c      c    c        ucuau      u  uauugcggu       a          ga 
   guu uc aauugagauucaagcacuuuucu ugugg uuuaaggugu        auugc ug gcaagauguugaaugcag ggauu aua aacaaauuguca ac  uugcaugccuuaagu              uuauuuuuggu  gauuu aagcaacuuaacuac uaugu  c uuaaaa agaa aguacuca     ugcuau ac         gcaacaa uuuaauguua  a
   ||| || ||||||||||||||||||||||| ||||| ||||||||||        ||||| || |||||||||||||||||| ||||| ||| |||||||||||| ||  |||||||||||||||              |||||||||||  ||||| ||||||||||||||| |||||  | |||||| |||| ||||||||     |||||| ||         ||||||| ||||||||||   
   caa AG UUAACUCUAAGUUUGUGAAAaga guacc aaauuccaca        uaacg au cguuuuacaacuuacguu cuuaa uau uuguuuaacagu ug  aacguacggaauucg              gauaaaaacca  cuaag uuuguugaauuggug auaua  g aguuuu ucuu ucaugagu     augaua ug         uguuguu aaauuacagu  g
-ac   U  A                       a     u          agguacgu     a  c                  a     u   c            u  uu               ----------auuu           ac     c               a     ac a      a    c        ---uu      -  ---------       c          aa 

Annotation confidence Not enough data

Genome context

chr8: 11768911-11769382 [-]

Mature gma-miR9746h

• Accession: MIMAT0036373
• Description: Glycine max gma-miR9746h mature miRNA
• Sequence: 444 - AAAGUGUUUGAAUCUCAAUUAGAU - 467
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153