Stem-loop gma-MIR9747

Accession

MI0031036

Description

Glycine max gma-MIR9747 precursor miRNA

Literature search

1 open access papers mention gma-MIR9747
(1 sentences)

Sequence

2162 reads, 97.0 reads per million, 157 experiments

gcauUUAAAGUAUUUAAAUCGUUGCAUUaauaaaaauguccuaaaaucaauaaaaauugucucauuaaucaaaauucuuggucaacuaaagaaaaauaaauaaauuuauugauuugaggacauuuucauuCAUGCGAUGAUUUAAAUACUUUaaaug
.((((((((((((((((((((((((((.(((.((((((((((.(((((((((((.((((......)))).....(((((.........)))))...........))))))))))).)))))))))).))).))))))))))))))))))))))))))

Structure

g                          U   a          a           aauugucucauuaaucaaaa     ggu 
 cauUUAAAGUAUUUAAAUCGUUGCAU aau aaaauguccu aaaucaauaaa                    uucuu   c
 |||||||||||||||||||||||||| ||| |||||||||| |||||||||||                    |||||   a
 guaaaUUUCAUAAAUUUAGUAGCGUA uua uuuuacagga uuuaguuauuu                    aagaa   a
-                          C   c          g           ---------aaauaaauaaa     auc 

Annotation confidence Medium

Genome context

chr20: 32190614-32190770 [+]

Mature gma-miR9747-5p

• Accession: MIMAT0054443
• Description: Glycine max gma-miR9747-5p mature miRNA
• Sequence: 5 - UUAAAGUAUUUAAAUCGUUGCAUU - 28
• Evidence: experimental ; unknown

Mature gma-miR9747-3p

• Accession: MIMAT0036374
• Description: Glycine max gma-miR9747-3p mature miRNA
• Sequence: 131 - CAUGCGAUGAUUUAAAUACUUU - 152
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153