Stem-loop gma-MIR9748

Accession

MI0031037

Description

Glycine max gma-MIR9748 precursor miRNA

Literature search

1 open access papers mention gma-MIR9748
(1 sentences)

Sequence

525 reads, 22.0 reads per million, 128 experiments

uagcaGAAGGAAGUGUAGAGGGAUGACuuauauguauaggaucgguuuccuuguuuuuguacaaauaaguAAUUCCUAUAUGUUUCCUUCUAcgaa
....(((((((((((((.((((((.((((((.(((((((((.(((.....))).))))))))).)))))).)))))).))))))))))))).....

Structure

-uagc             G      G      a         u   u 
     aGAAGGAAGUGUA AGGGAU ACuuau uguauagga cgg u
     ||||||||||||| |||||| |||||| ||||||||| ||| u
     UCUUCCUUUGUAU UCCUUA ugaaua acauguuuu guu c
aagcA             A      A      a         u   c 

Annotation confidence High

Genome context

chr20: 3657809-3657904 [+]

Mature gma-miR9748-5p

• Accession: MIMAT0036375
• Description: Glycine max gma-miR9748-5p mature miRNA
• Sequence: 6 - GAAGGAAGUGUAGAGGGAUGAC - 27
• Evidence: experimental ; Illumina [1]

Mature gma-miR9748-3p

• Accession: MIMAT0054444
• Description: Glycine max gma-miR9748-3p mature miRNA
• Sequence: 71 - AAUUCCUAUAUGUUUCCUUCUA - 92
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153