Stem-loop gma-MIR399i

Accession

MI0031044

Description

Glycine max gma-MIR399i precursor miRNA

Literature search

14 open access papers mention gma-MIR399i
(88 sentences)

Sequence

21566 reads, 150.0 reads per million, 142 experiments

gaauaacaGUGCAAUUCUCCUUUGGCAGGuguugcauguguucucgcaugagaaugaccuuucUGCCAAAGGAGAAUUGCCCUGccauu
......(((.(((((((((((((((((((.((((((((((....))))))....))))...))))))))))))))))))).))).....

Structure

gaauaa   U                   --u    ----      u 
      caG GCAAUUCUCCUUUGGCAGG   guug    caugug u
      ||| |||||||||||||||||||   ||||    ||||||  
      GUC CGUUAAGAGGAAACCGUcu   cagu    guacgc c
-uuacc   C                   uuc    aaga      u 

Annotation confidence High

Genome context

chr15: 6566664-6566752 [+]

Mature gma-miR399i-5p

• Accession: MIMAT0054449
• Description: Glycine max gma-miR399i-5p mature miRNA
• Sequence: 9 - GUGCAAUUCUCCUUUGGCAGG - 29
• Evidence: experimental ; unknown

Mature gma-miR399i-3p

• Accession: MIMAT0036382
• Description: Glycine max gma-miR399i-3p mature miRNA
• Sequence: 64 - UGCCAAAGGAGAAUUGCCCUG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153