Stem-loop gma-MIR9746i

Accession

MI0031045

Description

Glycine max gma-MIR9746i precursor miRNA

Sequence

2990 reads, 49.0 reads per million, 160 experiments

auaucaagcuguuuacgguuauCCAAUUGAGAUUCAAGCACUUUUCuauguggcuuuaagguguguuugaauggaacaccuuaaauccaugaagaAAAGUGUUUGAAUUUCAAUUAGAUaaccauagacaacuugauau
((((((((.((((((.(((((((.(((((((((((((((((((((((.(((((.((((((((((...........)))))))))).))))).))))))))))))))))))))))).))))))).)))))).))))))))

Structure

        c      c       C                       a     c          guuu 
auaucaag uguuua gguuauC AAUUGAGAUUCAAGCACUUUUCu ugugg uuuaaggugu    g
|||||||| |||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||    a
uauaguuc acagau ccaaUAG UUAACUUUAAGUUUGUGAAAaga guacc aaauuccaca    a
        a      a       A                       a     u          aggu 

Annotation confidence High

Genome context

chr3: 2894473-2894611 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR9746i

Mature gma-miR9746i-5p

• Accession: MIMAT0054450
• Description: Glycine max gma-miR9746i-5p mature miRNA
• Sequence: 23 - CCAAUUGAGAUUCAAGCACUUUUC - 46
• Evidence: experimental ; unknown

Mature gma-miR9746i-3p

• Accession: MIMAT0036383
• Description: Glycine max gma-miR9746i-3p mature miRNA
• Sequence: 96 - AAAGUGUUUGAAUUUCAAUUAGAU - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153