Stem-loop gma-MIR9753

Accession

MI0031046

Description

Glycine max gma-MIR9753 precursor miRNA

Sequence

4838 reads, 25.0 reads per million, 178 experiments

acauuuuguuUUCCUUCUUGUCGACUUCUUAAAgacuaaaaccccaaaaccgaagcuccaaaauuagcccaucuauuguaacccuaagucccaaaucgugauauguauuuauuaauacuucuaauauaucACAAUUUGGGACUUAGGGCUACAAcagaagaguugguuuuggggcuuggguuuugugggcuuaggcuuuaagaagcccaaaaggaggaaaacaaaaugu
(((((((((((((((((((...(.((((((((((.((((..((((((((((.((((((((((((((((.(.(((.(((((.(((((((((((((((.(((((((((.................))))))))).))))))))))))))).))))).))).).)))))))))))))))).))))))).))).)))).)))))))))).)...)))))))))))))))))))

Structure

                   GUC A          a    aa   -       g                c a   a     a               c         auuuauu 
acauuuuguuUUCCUUCUU   G CUUCUUAAAg cuaa  ccc caaaacc aagcuccaaaauuagc c ucu uugua cccuaagucccaaau gugauaugu       a
|||||||||||||||||||   | |||||||||| ||||  ||| ||||||| |||||||||||||||| | ||| ||||| ||||||||||||||| |||||||||       a
uguaaaacaaaaggaggaa   c gaagaauuuc gauu  ggg guuuugg uucgggguuuugguug g aga AACAU GGGAUUCAGGGUUUA CAcuauaua       u
                   aac c          g    -c   u       g                a a   c     C               A         aucuuca 

Annotation confidence Low

Genome context

chr14: 38183556-38183784 [-]

Mature gma-miR9753-5p

• Accession: MIMAT0054451
• Description: Glycine max gma-miR9753-5p mature miRNA
• Sequence: 11 - UUCCUUCUUGUCGACUUCUUAAA - 33
• Evidence: experimental ; unknown

Mature gma-miR9753-3p

• Accession: MIMAT0036384
• Description: Glycine max gma-miR9753-3p mature miRNA
• Sequence: 131 - ACAAUUUGGGACUUAGGGCUACAA - 154
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153