Stem-loop gma-MIR4348c

Accession

MI0031051

Description

Glycine max gma-MIR4348c precursor miRNA

Literature search

1 open access papers mention gma-MIR4348c
(1 sentences)

Sequence

20948 reads, 99.0 reads per million, 171 experiments

auaugUGUUAAACUUGCAAGAUGACAuuauuaugauaguuguagaaacauuuagaauagcaagaccaguaugugagaguauucaacaucguaauauuaUCAUCUUGUAAGUUUAACACAuaau
.(((((((((((((((((((((((...(((((((((.((((.....((.((((.(...((.......)).).)))).))...)))))))))))))...)))))))))))))))))))))))..

Structure

-a                       CAu         a    uagaa  a    g aua  aa 
  uaugUGUUAAACUUGCAAGAUGA   uauuaugau guug     ac uuua a   gc  g
  |||||||||||||||||||||||   ||||||||| ||||     || |||| |   ||  a
  auACACAAUUUGAAUGUUCUACU   auaaugcua caac     ug gagu u   ug  c
ua                       auu         -    --uua  a    g --a  ac 

Annotation confidence High

Genome context

chr2: 10880344-10880466 [+]

Mature gma-miR4348c-5p

• Accession: MIMAT0036389
• Description: Glycine max gma-miR4348c-5p mature miRNA
• Sequence: 6 - UGUUAAACUUGCAAGAUGACA - 26
• Evidence: experimental ; Illumina [1]

Mature gma-miR4348c-3p

• Accession: MIMAT0054456
• Description: Glycine max gma-miR4348c-3p mature miRNA
• Sequence: 99 - UCAUCUUGUAAGUUUAACACA - 119
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153