Stem-loop gma-MIR9757

Accession

MI0031052

Description

Glycine max gma-MIR9757 precursor miRNA

Sequence

5380 reads, 30.0 reads per million, 178 experiments

ccaaugcuaccaaacacuggcuCAACCCUCCUCAGUUAGAUCUCgucaaacagcgaggcgugaauucgcuccuugacuuacuugccuugcuauuuaaggagAUCCAAUUGAGGAGGGUUGAGCcaguuuuugguagcauugg
((((((((((((((.((((((((((((((((((((((.((((((.(.(((.((((((((((((..(((.....))).))))..)))))))).))).).)))))).)))))))))))))))))))))).))))))))))))))

Structure

              c                      A      g c   c        --    au   c 
ccaaugcuaccaaa acuggcuCAACCCUCCUCAGUU GAUCUC u aaa agcgaggc  guga  ucg u
|||||||||||||| |||||||||||||||||||||| |||||| | ||| ||||||||  ||||  ||| c
gguuacgaugguuu ugacCGAGUUGGGAGGAGUUAA CUAgag a uuu ucguuccg  cauu  agu c
              u                      C      g a   a        uu    -c   u 

Annotation confidence High

Genome context

chr2: 45220498-45220639 [+]

Mature gma-miR9757-5p

• Accession: MIMAT0036390
• Description: Glycine max gma-miR9757-5p mature miRNA
• Sequence: 23 - CAACCCUCCUCAGUUAGAUCUC - 44
• Evidence: experimental ; Illumina [1]

Mature gma-miR9757-3p

• Accession: MIMAT0054457
• Description: Glycine max gma-miR9757-3p mature miRNA
• Sequence: 102 - AUCCAAUUGAGGAGGGUUGAGC - 123
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153