Stem-loop gma-MIR9762

Accession

MI0031061

Description

Glycine max gma-MIR9762 precursor miRNA

Sequence

8614 reads, 66.0 reads per million, 178 experiments

uuacuugugcuuuuauuuucuguuuucacuauuuaauuauaaaaaugucauauuguuuucaauuuguuuUCUGUUUCAAAGAUUUGUACaggaaacauugaaaacaacuuuuuuuuguucucuguuuccuuUACAGAUCUUUGGAAACAGGCaacagauugaaaauaaggugucaauuuuguaauuaaaaaaagaaaaccggaaauaaauacacaaguaa
.((((((((..(((((((((.((((((....(((((((((((((.((.(((.((((((((((((((((.(((((((((((((((((((.((((((((..((.(((((.......))))).)))))))))).))))))))))).)))))))).)))))))))))))))).))).)).)))))))))))))....)))))).)))))))))..)))))))).

Structure

u        cu         u      acua             a  u   a                u        -           C        uu  a     cu 
 uacuugug  uuuauuuuc guuuuc    uuuaauuauaaaa ug cau uuguuuucaauuuguu UCUGUUUC AAAGAUUUGUA aggaaaca  ga aacaa  u
 ||||||||  ||||||||| ||||||    ||||||||||||| || ||| |||||||||||||||| |||||||| ||||||||||| ||||||||  || |||||  u
 augaacac  aaauaaagg caaaag    aaauuaauguuuu ac gug aauaaaaguuagacaa GGACAAAG UUUCUAGACAU uccuuugu  cu uuguu  u
a        au         c      aaaa             a  u   g                C        G           u        --  c     uu 

Annotation confidence High

Genome context

chr2: 39069334-39069553 [+]

Mature gma-miR9762-5p

• Accession: MIMAT0054466
• Description: Glycine max gma-miR9762-5p mature miRNA
• Sequence: 70 - UCUGUUUCAAAGAUUUGUAC - 89
• Evidence: experimental ; unknown

Mature gma-miR9762-3p

• Accession: MIMAT0036399
• Description: Glycine max gma-miR9762-3p mature miRNA
• Sequence: 132 - UACAGAUCUUUGGAAACAGGC - 152
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153