Stem-loop tch-mir-181a-1

Accession

MI0031122

Description

Tupaia chinensis tch-mir-181a-1 precursor miRNA

Sequence

2737585 reads, 11095.0 reads per million, 30 experiments

AACAUUCAACGCUGUCGGUGAGUuuggaauuauaaucaaaACCAUCGACCGUUGAUUGUAC
.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).)))..

Structure

-A   U      CU       A    g  au 
  ACA UCAACG  GUCGGUG GUuu ga  u
  ||| ||||||  ||||||| |||| ||  a
  UGU AGUUGC  CAGCUAC CAaa cu  u
CA   U      --       -    a  aa 

Annotation confidence High

Genome context

KB320907.1: 1699302-1699362 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-181a-1

Mature tch-miR-181a-5p

• Accession: MIMAT0036463
• Description: Tupaia chinensis tch-miR-181a-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-181a-1-3p

• Accession: MIMAT0058986
• Description: Tupaia chinensis tch-miR-181a-1-3p mature miRNA
• Sequence: 41 - ACCAUCGACCGUUGAUUGUAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254