Stem-loop tch-mir-7-1

Accession

MI0031124

Description

Tupaia chinensis tch-mir-7-1 precursor miRNA

Sequence

2404453 reads, 10169.0 reads per million, 30 experiments

UGGAAGACUAGUGAUUUUGUUGUUcugauaugugaugaCAACAAGUCACAGCCGGCCUCA
.((..(.((.(((((((.((((((.(........).))))))))))))))).)..))...

Structure

--U  AA A  A       U      c gau 
   GG  G CU GUGAUUU GUUGUU u   a
   ||  | || ||||||| |||||| |    
   CC  C GA CACUGAA CAACag a   u
ACU  GG C  -       -      u gug 

Annotation confidence High

Genome context

KB370753.1: 2231644-2231703 [+]

Mature tch-miR-7-5p

• Accession: MIMAT0036465
• Description: Tupaia chinensis tch-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature tch-miR-7-1-3p

• Accession: MIMAT0058989
• Description: Tupaia chinensis tch-miR-7-1-3p mature miRNA
• Sequence: 39 - CAACAAGUCACAGCCGGCCUCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254