Stem-loop tch-mir-450a-1

Accession

MI0031134

Description

Tupaia chinensis tch-mir-450a-1 precursor miRNA

Sequence

9815 reads, 37.0 reads per million, 30 experiments

UUUUGCGAUGUGUUCCUAAUAugcauuuagaaauauaUUGGGAACAUUUUGCAUGCAU
...(((((.((((((((((((((..........)))))))))))))).))))).....

Structure

--UUU     U              cauu 
     UGCGA GUGUUCCUAAUAug    u
     ||||| ||||||||||||||     
     ACGUU UACAAGGGUUauau    a
UACGU     U              aaag 

Annotation confidence High

Genome context

KB370352.1: 2042126-2042183 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-450a-1

Mature tch-miR-450a-5p

• Accession: MIMAT0036475
• Description: Tupaia chinensis tch-miR-450a-5p mature miRNA
• Sequence: 1 - UUUUGCGAUGUGUUCCUAAUA - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-450a-1-3p

• Accession: MIMAT0059001
• Description: Tupaia chinensis tch-miR-450a-1-3p mature miRNA
• Sequence: 38 - UUGGGAACAUUUUGCAUGCAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254