Stem-loop tch-mir-199b

Accession

MI0031138

Description

Tupaia chinensis tch-mir-199b precursor miRNA

Sequence

609594 reads, 1872.0 reads per million, 30 experiments

CCCAGUGUUUAGACUAUCUGUUcaggacucccgaauuguACAGUAGUCUGCACAUUGGUU
.(((((((.(((((((.((((.(((..........))).))))))))))).)))))))..

Structure

-C       U       U    U   gacu 
  CCAGUGU UAGACUA CUGU cag    c
  ||||||| ||||||| |||| |||     
  GGUUACA GUCUGAU GACA guu    c
UU       C       -    u   aagc 

Annotation confidence High

Genome context

KB320843.1: 1502684-1502743 [+]

Mature tch-miR-199b-5p

• Accession: MIMAT0059004
• Description: Tupaia chinensis tch-miR-199b-5p mature miRNA
• Sequence: 1 - CCCAGUGUUUAGACUAUCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-199b-3p

• Accession: MIMAT0036479
• Description: Tupaia chinensis tch-miR-199b-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254