Stem-loop tch-mir-6529

Accession

MI0031140

Description

Tupaia chinensis tch-mir-6529 precursor miRNA

Sequence

170638 reads, 733.0 reads per million, 30 experiments

GAGAGAUCAGAGGCGCAGAGUacgucaaugucaaugaagCCUGUGCCUUUUACCUCUUUAA
(((((...((((((((((.((...(((.......))).))))))))))))...)))))...

Structure

---     AUC          A  acg   au 
   GAGAG   AGAGGCGCAG GU   uca  g
   |||||   |||||||||| ||   |||  u
   UUCUC   UUUCCGUGUC Cg   agu  c
AAU     CAU          -  --a   aa 

Annotation confidence High

Genome context

KB364937.1: 143149-143209 [+]

Mature tch-miR-6529-5p

• Accession: MIMAT0036481
• Description: Tupaia chinensis tch-miR-6529-5p mature miRNA
• Sequence: 1 - GAGAGAUCAGAGGCGCAGAGU - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-6529-3p

• Accession: MIMAT0059007
• Description: Tupaia chinensis tch-miR-6529-3p mature miRNA
• Sequence: 40 - CCUGUGCCUUUUACCUCUUUAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254