Stem-loop tch-mir-141

Accession

MI0031147

Description

Tupaia chinensis tch-mir-141 precursor miRNA

Sequence

679776 reads, 2032.0 reads per million, 30 experiments

CAUCUUCCAGUACAGUGUUGGAUGGucugaucgugaagcuccUAACACUGUCUGGUAAAGAUGGc
((((((((((.((((((((((..((.((........)))).))))))))))))))..))))))..

Structure

--      --    U          AU  u  gau 
  CAUCUU  CCAG ACAGUGUUGG  GG cu   c
  ||||||  |||| ||||||||||  || ||    
  GUAGAA  GGUC UGUCACAAUc  uc ga   g
cG      AU    -          -c  -  agu 

Annotation confidence High

Genome context

KB369804.1: 349690-349754 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-141

Mature tch-miR-141-5p

• Accession: MIMAT0059014
• Description: Tupaia chinensis tch-miR-141-5p mature miRNA
• Sequence: 1 - CAUCUUCCAGUACAGUGUUGGAUGG - 25
• Evidence: experimental ; Illumina [1]

Mature tch-miR-141-3p

• Accession: MIMAT0036489
• Description: Tupaia chinensis tch-miR-141-3p mature miRNA
• Sequence: 43 - UAACACUGUCUGGUAAAGAUGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254