Stem-loop tch-mir-424

Accession

MI0031152

Description

Tupaia chinensis tch-mir-424 precursor miRNA

Sequence

36024 reads, 153.0 reads per million, 30 experiments

CAGCAGCAAUUCAUGUUUUGAagugcuguaaaggguuCAAAACGUGAGGCGCUGCUAUA
.((((((..(((((((((((((.(.((....)).))))))))))))))..))))))...

Structure

--C      AA             g g  g 
   AGCAGC  UUCAUGUUUUGAa u cu u
   ||||||  ||||||||||||| | ||  
   UCGUCG  GAGUGCAAAACuu g ga a
AUA      CG             - g  a 

Annotation confidence High

Genome context

KB370352.1: 2048280-2048338 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-424

Mature tch-miR-424-5p

• Accession: MIMAT0036495
• Description: Tupaia chinensis tch-miR-424-5p mature miRNA
• Sequence: 1 - CAGCAGCAAUUCAUGUUUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-424-3p

• Accession: MIMAT0059018
• Description: Tupaia chinensis tch-miR-424-3p mature miRNA
• Sequence: 38 - CAAAACGUGAGGCGCUGCUAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254