Stem-loop tch-mir-30b

Accession

MI0031160

Description

Tupaia chinensis tch-mir-30b precursor miRNA

Sequence

418778 reads, 1600.0 reads per million, 30 experiments

UGUAAACAUCCUACACUCAGCUguaaugcauggauuggCUGGGAGGUGGAUGUUUACCU
.((((((((((.((.(((((((..(((......))))))))))..))))))))))))..

Structure

-U          U  -A       gu   gc 
  GUAAACAUCC AC  CUCAGCU  aau  a
  |||||||||| ||  |||||||  |||   
  CAUUUGUAGG UG  GGGUCgg  uua  u
UC          -  GA       --   gg 

Annotation confidence High

Genome context

KB320915.1: 202463-202521 [+]

Mature tch-miR-30b-5p

• Accession: MIMAT0036503
• Description: Tupaia chinensis tch-miR-30b-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-30b-3p

• Accession: MIMAT0059024
• Description: Tupaia chinensis tch-miR-30b-3p mature miRNA
• Sequence: 39 - CUGGGAGGUGGAUGUUUACCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254