miRBase entry: tch-mir-450a-2

Stem-loop tch-mir-450a-2


Accession
MI0031165
Description
Tupaia chinensis tch-mir-450a-2 precursor miRNA


Sequence

9900 reads, 37.0 reads per million, 30 experiments
UUUUGCGAUGUGUUCCUAAUAugucaaacaaauguAUUGGGAACAUUUUGCAUUCGU
...(((((.(((((((((((((((.......))))))))))))))).))))).....

Structure
--UUU     U               ca 
     UGCGA GUGUUCCUAAUAugu  a
     ||||| |||||||||||||||  a
     ACGUU UACAAGGGUUAugua  c
UGCUU     U               aa 


Annotation confidence High
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Genome context
KB370352.1: 2042293-2042349 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from tch-mir-450a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-450a-5p

Accession MIMAT0036475
Description Tupaia chinensis tch-miR-450a-5p mature miRNA
Sequence 1 - UUUUGCGAUGUGUUCCUAAUA - 21
Evidence experimental
Illumina [1]

Mature tch-miR-450a-2-3p

Accession MIMAT0059002
Description Tupaia chinensis tch-miR-450a-2-3p mature miRNA
Sequence 36 - AUUGGGAACAUUUUGCAUUCGU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254