miRBase entry: tch-mir-147b

Stem-loop tch-mir-147b


Accession
MI0031170
Description
Tupaia chinensis tch-mir-147b precursor miRNA


Sequence

2340 reads, 9.0 reads per million, 30 experiments
AGUGGAAACACUUCUGCACCAACUagauuauggguaucaGUGUGCGGAAAUGCUUCUGCU
(((((((.((.((((((((..(((.(((.......)))))))))))))).)).)))))))

Structure
       A  C        CA   a   ua 
AGUGGAA CA UUCUGCAC  ACU gau  u
||||||| || ||||||||  ||| |||  g
UCGUCUU GU AAGGCGUG  UGa cua  g
       C  A        --   -   ug 


Annotation confidence High
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Genome context
KB369669.1: 1099427-1099486 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-147b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-147b-5p

Accession MIMAT0059034
Description Tupaia chinensis tch-miR-147b-5p mature miRNA
Sequence 1 - AGUGGAAACACUUCUGCACCAACU - 24
Evidence experimental
Illumina [1]

Mature tch-miR-147b-3p

Accession MIMAT0036512
Description Tupaia chinensis tch-miR-147b-3p mature miRNA
Sequence 40 - GUGUGCGGAAAUGCUUCUGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254