Stem-loop tch-mir-376c

Accession

MI0031173

Description

Tupaia chinensis tch-mir-376c precursor miRNA

Sequence

2916 reads, 12.0 reads per million, 30 experiments

GUGGAUAUUCCUUCUAUGUUUAuguuauugaugguuaAACAUAGAGGAAAUUCCACGU
(((((..(((((.(((((((((.............))))))))))))))..)))))..

Structure

--     UA     U         uguua 
  GUGGA  UUCCU CUAUGUUUA     u
  |||||  ||||| |||||||||     u
  CACCU  AAGGA GAUACAAau     g
UG     UA     -         uggua 

Annotation confidence High

Genome context

KB321140.1: 4900221-4900278 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tch-mir-376c

Mature tch-miR-376c-5p

• Accession: MIMAT0059037
• Description: Tupaia chinensis tch-miR-376c-5p mature miRNA
• Sequence: 1 - GUGGAUAUUCCUUCUAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-376c-3p

• Accession: MIMAT0036515
• Description: Tupaia chinensis tch-miR-376c-3p mature miRNA
• Sequence: 38 - AACAUAGAGGAAAUUCCACGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254