miRBase entry: tch-mir-17

Stem-loop tch-mir-17

Accession

MI0031174

Description

Tupaia chinensis tch-mir-17 precursor miRNA

Sequence

CAAAGUGCUUACAGUGCAGGUAGugauaugugcaucuacugcagugaaggcacuuguagc
..((((((((.((.(((((.(((((.......)).)))))))).)).)))))))).....

Structure

---CA        A  G     G   -  au 
     AAGUGCUU CA UGCAG UAG ug  a
     |||||||| || ||||| ||| ||  u
     uucacgga gu acguc auc ac  g
cgaug        a  g     -   u  gu

Annotation confidence Not enough data

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Genome context

KB320410.1: 3473178-3473237 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-17

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-17-5p

Accession	MIMAT0036516
Description	Tupaia chinensis tch-miR-17-5p mature miRNA
Sequence	1 - CAAAGUGCUUACAGUGCAGGUAG - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254