Stem-loop tch-mir-23b

Accession

MI0031178

Description

Tupaia chinensis tch-mir-23b precursor miRNA

Sequence

1217760 reads, 3765.0 reads per million, 30 experiments

GGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCACg
((((((((((((((.((((((..............)))))))).))))))))))..))...

Structure

---  --          -  C      gugacu 
   GG  GUUCCUGGCA UG UGAUUU      u
   ||  |||||||||| || ||||||       
   CC  UAGGGACCGU AC ACUAaa      a
gCA  AU          U  -      auuaga 

Annotation confidence High

Genome context

KB365955.1: 264385-264445 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-23b

Mature tch-miR-23b-5p

• Accession: MIMAT0059042
• Description: Tupaia chinensis tch-miR-23b-5p mature miRNA
• Sequence: 1 - GGGUUCCUGGCAUGCUGAUUU - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-23b-3p

• Accession: MIMAT0036520
• Description: Tupaia chinensis tch-miR-23b-3p mature miRNA
• Sequence: 38 - AUCACAUUGCCAGGGAUUACCAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254