Stem-loop tch-mir-221

Accession

MI0031181

Description

Tupaia chinensis tch-mir-221 precursor miRNA

Sequence

394680 reads, 1663.0 reads per million, 30 experiments

ACCUGGCAUACAAUGUAGAUUUcuguguuuguugggcaacAGCUACAUUGUCUGCUGGGUU
((((((((.(((((((((....((((((((...)))).))))))))))))).)))))))).

Structure

-        U         AUUU    -    g 
 ACCUGGCA ACAAUGUAG    cugu guuu  
 |||||||| |||||||||    |||| |||| u
 UGGGUCGU UGUUACAUC    GAca cggg  
U        C         ----    a    u 

Annotation confidence High

Genome context

KB362665.1: 269612-269672 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-221

Mature tch-miR-221-5p

• Accession: MIMAT0059046
• Description: Tupaia chinensis tch-miR-221-5p mature miRNA
• Sequence: 1 - ACCUGGCAUACAAUGUAGAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-221-3p

• Accession: MIMAT0036523
• Description: Tupaia chinensis tch-miR-221-3p mature miRNA
• Sequence: 41 - AGCUACAUUGUCUGCUGGGUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254