Stem-loop tch-mir-199a

Accession

MI0031188

Description

Tupaia chinensis tch-mir-199a precursor miRNA

Sequence

790487 reads, 2424.0 reads per million, 30 experiments

CCCAGUGUUCAGACUACCUGUUcaggacaaugccguuguACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))..

Structure

-C       U        C   U  --  ac 
  CCAGUGU CAGACUAC UGU ca  gg  a
  ||||||| |||||||| ||| ||  ||   
  GGUUACA GUCUGAUG ACA gu  cc  a
UU       C        -   u  ug  gu 

Annotation confidence High

Genome context

KB320481.1: 6496580-6496639 [+]

Mature tch-miR-199a-5p

• Accession: MIMAT0059052
• Description: Tupaia chinensis tch-miR-199a-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-199a-3p

• Accession: MIMAT0036529
• Description: Tupaia chinensis tch-miR-199a-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254