Stem-loop tch-mir-122

Accession

MI0031189

Description

Tupaia chinensis tch-mir-122 precursor miRNA

Literature search

0 open access papers mention tch-mir-122
(0 sentences)

Sequence

25307 reads, 96.0 reads per million, 30 experiments

UGGAGUGUGACAAUGGUGUUUGuguccaagcuaucaAACGCCAUUAUCACACUAAAU
...(((((((.(((((((((((............))))))))))).)))))))....

Structure

-UGG       C           ugucc 
    AGUGUGA AAUGGUGUUUG     a
    ||||||| |||||||||||      
    UCACACU UUACCGCAAac     a
UAAA       A           uaucg 

Annotation confidence High

Genome context

KB320389.1: 2600243-2600299 [+]

Mature tch-miR-122-5p

• Accession: MIMAT0036530
• Description: Tupaia chinensis tch-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-122-3p

• Accession: MIMAT0059053
• Description: Tupaia chinensis tch-miR-122-3p mature miRNA
• Sequence: 37 - AACGCCAUUAUCACACUAAAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254