miRBase entry: tch-mir-27b

Stem-loop tch-mir-27b

Accession

MI0031194

Description

Tupaia chinensis tch-mir-27b precursor miRNA

Sequence

agagcuuagcugauuggugaacagugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))..

Structure

--           g    g       ugau   u 
  agagcuuagcu auug ugaacag    ugg  
  ||||||||||| |||| |||||||    ||| u
  UCUUGAAUCGG UGAC ACUUguu    gcc  
CG           -    -       --uc   u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KB365955.1: 264611-264673 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-27b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-27b-3p

Accession	MIMAT0036535
Description	Tupaia chinensis tch-miR-27b-3p mature miRNA
Sequence	43 - UUCACAGUGGCUAAGUUCUGC - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254