Stem-loop tch-mir-432

Accession

MI0031195

Description

Tupaia chinensis tch-mir-432 precursor miRNA

Sequence

21203 reads, 91.0 reads per million, 30 experiments

UCUUGGAGUAGGUCAUUGGGUGgauccucuguuucccuaugugggccaCUGGAUGGCUCCUCCAUGUCU
...(((((..(((((((.(((((.(((.(...........).)))))))).))))))).))))).....

Structure

--UCU     UA       G     a   u uguu 
     UGGAG  GGUCAUU GGUGg ucc c    u
     |||||  ||||||| ||||| ||| |    c
     ACCUC  UCGGUAG UCacc ggg g    c
UCUGU     -C       G     -   u uauc 

Annotation confidence High

Genome context

KB321140.1: 4732181-4732249 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-432

Mature tch-miR-432-5p

• Accession: MIMAT0036536
• Description: Tupaia chinensis tch-miR-432-5p mature miRNA
• Sequence: 1 - UCUUGGAGUAGGUCAUUGGGUG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-432-3p

• Accession: MIMAT0059059
• Description: Tupaia chinensis tch-miR-432-3p mature miRNA
• Sequence: 49 - CUGGAUGGCUCCUCCAUGUCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254