Stem-loop tch-mir-376a-1

Accession

MI0031196

Description

Tupaia chinensis tch-mir-376a-1 precursor miRNA

Sequence

1951 reads, 8.0 reads per million, 30 experiments

GUAGAUUCUCCUUCUAUGAuuacgugcuugaugguuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.(((((((((...(((....)))))))))))))))).)))).))..

Structure

--  A    C    U         cgu   u 
  GU GAUU UCCU CUAUGAuua   gcu g
  || |||| |||| |||||||||   |||  
  CA CUAA AGGA GAUACUAau   ugg a
UG  C    A    -         ---   u 

Annotation confidence High

Genome context

KB321140.1: 4900596-4900653 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tch-mir-376a-1

Mature tch-miR-376a-1-5p

• Accession: MIMAT0059060
• Description: Tupaia chinensis tch-miR-376a-1-5p mature miRNA
• Sequence: 1 - GUAGAUUCUCCUUCUAUGA - 19
• Evidence: experimental ; Illumina [1]

Mature tch-miR-376a-3p

• Accession: MIMAT0036537
• Description: Tupaia chinensis tch-miR-376a-3p mature miRNA
• Sequence: 38 - AUCAUAGAGGAAAAUCCACGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254