Stem-loop tch-mir-139

Accession

MI0031199

Description

Tupaia chinensis tch-mir-139 precursor miRNA

Sequence

651720 reads, 2889.0 reads per million, 30 experiments

UCUACAGUGCACGUGUCUCCAGUguggcucagaggcUGGAGACGCGGCCCUGUCGGAGU
(((((((.((.((((((((((((.(.......).)))))))))))))).)))).)))..

Structure

--   -    U  A            g gg 
  UCU ACAG GC CGUGUCUCCAGU u  c
  ||| |||| || |||||||||||| |  u
  AGG UGUC CG GCGCAGAGGUcg a  c
UG   C    C  -            g ga 

Annotation confidence High

Genome context

KB320452.1: 1961274-1961332 [-]

Mature tch-miR-139-5p

• Accession: MIMAT0036540
• Description: Tupaia chinensis tch-miR-139-5p mature miRNA
• Sequence: 1 - UCUACAGUGCACGUGUCUCCAGU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-139-3p

• Accession: MIMAT0059064
• Description: Tupaia chinensis tch-miR-139-3p mature miRNA
• Sequence: 37 - UGGAGACGCGGCCCUGUCGGAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254