miRBase entry: tch-mir-181b

Stem-loop tch-mir-181b

Accession

MI0031203

Description

Tupaia chinensis tch-mir-181b precursor miRNA

Sequence

AACAUUCAUUGCUGUCGGUGGGUugaacuguguggacaagcucacugaacaaugaaugca
..(((((((((...((((((((((....(((....))))))))))))).)))))))))..

Structure

AA         CUG          gaac   g 
  CAUUCAUUG   UCGGUGGGUu    ugu u
  |||||||||   ||||||||||    |||  
  guaaguaac   agucacucga    aca g
ac         --a          ----   g

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KB320907.1: 1699121-1699180 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-181b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-181b-5p

Accession	MIMAT0036543
Description	Tupaia chinensis tch-miR-181b-5p mature miRNA
Sequence	1 - AACAUUCAUUGCUGUCGGUGGGU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254