Stem-loop tch-mir-195

Accession

MI0031209

Description

Tupaia chinensis tch-mir-195 precursor miRNA

Sequence

252822 reads, 978.0 reads per million, 30 experiments

UAGCAGCACAGAAAUAUUGGCACUGggaagcaagccugCCAAUAUUGGCUGCGCUGCUCCA
.((((((.(((.((((((((((..((........))))))))))))..))).))))))...

Structure

--U      A   -A          CU  gaa 
   AGCAGC CAG  AAUAUUGGCA  Gg   g
   |||||| |||  ||||||||||  ||    
   UCGUCG GUC  UUAUAACCgu  cc   c
ACC      C   GG          --  gaa 

Annotation confidence High

Genome context

KB320771.1: 1661457-1661517 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-195

Mature tch-miR-195-5p

• Accession: MIMAT0036549
• Description: Tupaia chinensis tch-miR-195-5p mature miRNA
• Sequence: 1 - UAGCAGCACAGAAAUAUUGGCACUG - 25
• Evidence: experimental ; Illumina [1]

Mature tch-miR-195-3p

• Accession: MIMAT0059072
• Description: Tupaia chinensis tch-miR-195-3p mature miRNA
• Sequence: 39 - CCAAUAUUGGCUGCGCUGCUCCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254