Stem-loop tch-mir-219

Accession

MI0031211

Description

Tupaia chinensis tch-mir-219 precursor miRNA

Sequence

25442 reads, 109.0 reads per million, 30 experiments

UGAUUGUCCAAACGCAAUUCUcgagucuauggcuccggccgAGAGUUGAGUCUGGACGUCCCGa
.(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))....

Structure

---U   U     A  G         a   uau 
    GAU GUCCA AC CAAUUCUcg guc   g
    ||| ||||| || ||||||||| |||   g
    CUG CAGGU UG GUUGAGAgc cgg   c
aGCC   -     C  A         -   ccu 

Annotation confidence High

Genome context

KB320528.1: 317-380 [-]

Mature tch-miR-219-5p

• Accession: MIMAT0036551
• Description: Tupaia chinensis tch-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCU - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-219-3p

• Accession: MIMAT0059074
• Description: Tupaia chinensis tch-miR-219-3p mature miRNA
• Sequence: 42 - AGAGUUGAGUCUGGACGUCCCG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254