Stem-loop tch-mir-656

Accession

MI0031216

Description

Tupaia chinensis tch-mir-656 precursor miRNA

Sequence

14903 reads, 59.0 reads per million, 30 experiments

AGGUUGCCUGUGAGGUGUUCAcuuucuauacgaugAAUAUUAUACAGUCAACCUCU
((((((.(((((.((((((((...((.....)))))))))).))))).))))))..

Structure

--      C     A        cuu  u 
  AGGUUG CUGUG GGUGUUCA   uc a
  |||||| ||||| ||||||||   || u
  UCCAAC GACAU UUAUAAgu   ag a
UC      U     A        ---  c 

Annotation confidence High

Genome context

KB321140.1: 4928460-4928515 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-656

Mature tch-miR-656-5p

• Accession: MIMAT0059079
• Description: Tupaia chinensis tch-miR-656-5p mature miRNA
• Sequence: 1 - AGGUUGCCUGUGAGGUGUUCA - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-656-3p

• Accession: MIMAT0036556
• Description: Tupaia chinensis tch-miR-656-3p mature miRNA
• Sequence: 36 - AAUAUUAUACAGUCAACCUCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254