Stem-loop tch-mir-127

Accession

MI0031219

Description

Tupaia chinensis tch-mir-127 precursor miRNA

Sequence

2021241 reads, 8441.0 reads per million, 30 experiments

CUGAAGCUCAGAGGGCUCUGAUucagaaagaucaUCGGAUCCGUCUGAGCUUGGCU
.(.(((((((((.((.((((((((.....))..)))))).)).))))))))).)..

Structure

-C G         G  C      --  a 
  U AAGCUCAGA GG UCUGAU  uc g
  | ||||||||| || ||||||  || a
  G UUCGAGUCU CC AGGCUa  ag a
UC G         G  U      cu  a 

Annotation confidence High

Genome context

KB321140.1: 4730686-4730741 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-127

Mature tch-miR-127-5p

• Accession: MIMAT0059081
• Description: Tupaia chinensis tch-miR-127-5p mature miRNA
• Sequence: 1 - CUGAAGCUCAGAGGGCUCUGAU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-127-3p

• Accession: MIMAT0036559
• Description: Tupaia chinensis tch-miR-127-3p mature miRNA
• Sequence: 35 - UCGGAUCCGUCUGAGCUUGGCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254