Stem-loop tch-mir-28

Accession

MI0031226

Description

Tupaia chinensis tch-mir-28 precursor miRNA

Sequence

202765 reads, 656.0 reads per million, 30 experiments

AAGGAGCUCACAGUCUAUUGAguugccuuccugacuuucuCACUAGAUUGUGAGCUCCUGGA
.((((((((((((((((.((((................)))).))))))))))))))))...

Structure

--A                U    uugccuu 
   AGGAGCUCACAGUCUA UGAg       c
   |||||||||||||||| ||||        
   UCCUCGAGUGUUAGAU ACuc       c
AGG                C    uuucagu 

Annotation confidence High

Genome context

KB320975.1: 3389193-3389254 [-]

Mature tch-miR-28-5p

• Accession: MIMAT0036565
• Description: Tupaia chinensis tch-miR-28-5p mature miRNA
• Sequence: 1 - AAGGAGCUCACAGUCUAUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-28-3p

• Accession: MIMAT0059087
• Description: Tupaia chinensis tch-miR-28-3p mature miRNA
• Sequence: 41 - CACUAGAUUGUGAGCUCCUGGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254