miRBase entry: tch-mir-381

Stem-loop tch-mir-381

Accession

MI0031231

Description

Tupaia chinensis tch-mir-381 precursor miRNA

Sequence

agcgagguugcccuuuguauguucgguucauugacauagaaUAUACAAGGGCAAGCUCUCUGU
((.(((.((((((((.((((((((.(((....)))...)))))))))))))))).))).))..

Structure

--  c   g        u        --g   c 
  ag gag uugcccuu guauguuc   guu a
  || ||| |||||||| ||||||||   |||  
  UC CUC AACGGGAA CAUAUaag   cag u
UG  U   G        -        aua   u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KB321140.1: 4906349-4906411 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tch-mir-381

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-381-3p

Accession	MIMAT0036568
Description	Tupaia chinensis tch-miR-381-3p mature miRNA
Sequence	42 - UAUACAAGGGCAAGCUCUCUGU - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254