Stem-loop tch-mir-381

Accession

MI0031231

Description

Tupaia chinensis tch-mir-381 precursor miRNA

Sequence

588839 reads, 2378.0 reads per million, 30 experiments

AGCGAGGUUGCCCUUUGUAUGUUCgguucauugacauagaaUAUACAAGGGCAAGCUCUCUGU
((.(((.((((((((.((((((((.(((....)))...)))))))))))))))).))).))..

Structure

--  C   G        U        --g   c 
  AG GAG UUGCCCUU GUAUGUUC   guu a
  || ||| |||||||| ||||||||   |||  
  UC CUC AACGGGAA CAUAUaag   cag u
UG  U   G        -        aua   u 

Annotation confidence High

Genome context

KB321140.1: 4906349-4906411 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tch-mir-381

Mature tch-miR-381-5p

• Accession: MIMAT0059090
• Description: Tupaia chinensis tch-miR-381-5p mature miRNA
• Sequence: 1 - AGCGAGGUUGCCCUUUGUAUGUUC - 24
• Evidence: experimental ; Illumina [1]

Mature tch-miR-381-3p

• Accession: MIMAT0036568
• Description: Tupaia chinensis tch-miR-381-3p mature miRNA
• Sequence: 42 - UAUACAAGGGCAAGCUCUCUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254